DINIES
A deep-learning framework for multi-level peptide–protein interaction prediction | Nature Communications
Classification and prediction of protein–protein interaction interface using machine learning algorithm | Scientific Reports
Plantae | Proteome-wide, structure-based prediction of protein-protein interactions (Plant Physiol) | Plantae
Integrating 3D structural information into systems biology - Journal of Biological Chemistry
Frontiers | LZerD Protein-Protein Docking Webserver Enhanced With de novo Structure Prediction | Molecular Biosciences
Blind tests of RNA–protein binding affinity prediction | PNAS
Struct2Net
PepSite
PEPPI: protein-protein interaction prediction through parallel consensus
Molecules | Free Full-Text | Machine Learning Approaches for Protein–Protein Interaction Hot Spot Prediction: Progress and Comparative Assessment | HTML
Frontiers | In silico Approaches for the Design and Optimization of Interfering Peptides Against Protein–Protein Interactions | Molecular Biosciences
Available Protein -Protein Interaction Prediction Web Servers | Download Table
In silico target prediction for protein-protein interaction (PPI) small molecule inhibitors using CGBVS - In Silico 創薬
BindML: Software for Predicting Protein-Protein Interaction Sites using Phylogenetic Substitution Models
ProPrInt: Protein-protein Interaction Prediction Server
Protein Protein Interaction Server: InterProSurf
Robust and accurate prediction of protein–protein interactions by exploiting evolutionary information | Scientific Reports
SFPEL-LPI: Sequence-based feature projection ensemble learning for predicting LncRNA-protein interactions
Predicting Protein-Protein Interactions from Matrix-Based Protein Sequence Using Convolution Neural Network and Feature-Selective Rotation Forest | Scientific Reports
In silico target prediction for protein-protein interaction (PPI) small molecule inhibitors using CGBVS - In Silico 創薬
BindML: Software for Predicting Protein-Protein Interaction Sites using Phylogenetic Substitution Models
SPServer: split-statistical potentials for the analysis of protein structures and protein–protein interactions | BMC Bioinformatics | Full Text
Protein-assisted RNA fragment docking (RnaX) for modeling RNA–protein interactions using ModelX | PNAS
PLOS ONE: Protein-Protein Interaction Site Predictions with Three-Dimensional Probability Distributions of Interacting Atoms on Protein Surfaces
Protein complex prediction: A survey - ScienceDirect
Scheme for all-to-all protein-protein interaction predictions. Using a... | Download Scientific Diagram
Structure-based prediction of protein–protein interactions on a genome-wide scale | Nature
